Status: Confirmed ARS: Confirmed by ARS assay and identified by 10 genome-wide studies.
Genomic Location:
Chr15:908288-908537
Within divergent intergenic space between YOR316C-A and YOR317W.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS confirmed.
Helical Stability: Minimum -159.9 ΔG° (kcal/mol) at location 908528.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 21.3 min.
Yabuki et al. (2002) — Trep: 21.7 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XV-908 has unique ID: 580
ARS at XV-908 has unique ID: 580
Chr15:908288-908537
None curated.
Chr15:907546-908440
Chr15:906225-909035
Chr15:907700-908900 (orc2-1/wt peak ratio: 0.95)
Chr15:908375-908385
Chr15:907625-908900 (orc1-bah-delta/wt peak ratio: 0.64)
Chr15:907760 (Trep: 21.3 min.) (Confidence: 9)
Chr15:911721 (Trep: 21.7 min.)
Chr15:908780 (Peak first observed at 12.5 min.)
Chr15:908000 (Activity detected in: wild-type, rad53)
Chr15:908288-908537 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XV-908 has unique ID: 580
Breier et al. (2004): | T | T | T | G | T | T | T | A | T | G | T | T | T | A | G | G | T |
Nieduszynski et al. (2006): | T | T | G | T | T | T | A | T | G | T | T | T | A | G | G | T | ||||||||||||||||||||||||||
Xu et al. (2006): | T | G | T | T | T | A | T | G | T | T | T | A | G | G | T | T | A | A | C | G | A | T | A | G | A | C | A | T | A | T | T | T | A | T | ||||||||
Eaton et al. (2010): | T | T | T | G | T | T | T | A | T | G | T | T | T | A | G | G | T | T | A | A | C | G | A | T | A | G | A | C | A | T | A | T | T | |||||||||
ACS LOGO: |
ARS at XV-908 has unique ID: 580
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
* |
ARS at XV-908 has unique ID: 580
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XV-908 has unique ID: 580
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
PubMed | PubMed Central | Genome Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at XV-908 has unique ID: 580