Status: Confirmed ARS: Confirmed by ARS assay and identified by 10 genome-wide studies.
Genomic Location:
Chr16:289483-289704
Within tandem intergenic space between YPL140C and YPL139C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -147.2 ΔG° (kcal/mol) at location 289673.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 20.6 min.
Yabuki et al. (2002) — Trep: 22.9 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XVI-290 has unique ID: 606
ARS at XVI-290 has unique ID: 606
Chr16:289483-289704
None curated.
Chr16:289033-289668
Chr16:288615-290570
Chr16:289200-290200 (orc2-1/wt peak ratio: 0.45)
Chr16:289525-289535
Chr16:289100-290225 (orc1-bah-delta/wt peak ratio: 0.58)
Chr16:283392 (Trep: 20.6 min.) (Confidence: 9)
Chr16:289383 (Trep: 22.9 min.)
Chr16:289250 (Peak first observed at 12.5 min.)
Chr16:289750 (Activity detected in: wild-type, rad53)
Chr16:289483-289704 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XVI-290 has unique ID: 606
Nieduszynski et al. (2006): | T | A | A | T | T | A | A | T | G | T | T | T | A | C | T | T | ||||||||||||||||||||||||||
Xu et al. (2006): | A | T | A | A | T | T | A | A | T | G | T | T | T | A | C | T | T | C | A | G | A | C | A | A | T | A | A | A | A | C | A | T | T | A | ||||||||
Eaton et al. (2010): | A | T | A | A | T | T | A | A | T | G | T | T | T | A | C | T | T | C | A | G | A | C | A | A | T | A | A | A | A | C | A | T | T | |||||||||
ACS LOGO: |
ARS at XVI-290 has unique ID: 606
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
S. cerevisiae | T | A | G | A | G | C | A | A | T | T | C | T | C | A | A | G | C | T | A | A | T | A | A | T | T | A | A | T | G | T | T | T | A | C | T | T | C | A | G | A | C | A | A | T | A | A | A | A | C | A | T | T | A | A | A | A |
S. kudriavzevii | T | A | A | A | T | T | C | C | T | C | C | C | C | A | A | G | A | T | T | A | C | A | G | T | T | T | A | T | G | T | T | T | T | T | C | T | T | T | T | T | A | A | T | A | T | A | A | G | C | A | T | T | C | A | G | A |
S. mikatae | - | - | G | A | G | T | T | A | T | T | C | C | A | A | G | A | G | T | T | A | T | T | T | T | T | T | A | T | G | T | T | T | A | T | T | T | G | A | G | T | C | A | A | A | A | T | A | A | C | A | T | T | C | C | A | G |
S. paradoxus | - | - | G | A | - | - | T | A | C | T | T | T | C | A | A | T | C | T | T | A | C | A | A | T | T | T | A | T | G | T | T | T | A | C | T | T | T | A | G | T | T | A | G | A | A | G | A | A | C | A | T | T | T | G | A | G |
S. bayanus | T | - | - | - | - | - | - | - | - | - | - | - | - | - | A | A | G | C | T | A | T | G | A | T | T | T | A | T | G | T | T | T | A | T | C | T | T | T | T | T | C | A | A | G | T | A | A | A | C | A | T | T | C | A | G | A |
: | : | : | : | : | : | : | * | * | * | : | * | * | * | * | * | * | : | * | : | : | * | : | * | : | * | * | * | * | : |
ARS at XVI-290 has unique ID: 606
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XVI-290 has unique ID: 606
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at XVI-290 has unique ID: 606