Status: Confirmed ARS: Confirmed by ARS assay and identified by 10 genome-wide studies.
Genomic Location:
Chr11:416822-417055
Within tandem intergenic space between YKL014C and YKL013C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -149.6 ΔG° (kcal/mol) at location 417032.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 23.9 min.
Yabuki et al. (2002) — Trep: 23.3 min.
Alvino et al. (2007) — Peak first observed at 17.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XI-417 has unique ID: 381
ARS at XI-417 has unique ID: 381
Chr11:416822-417055
None curated.
Chr11:416554-417149
Chr11:416125-418015
Chr11:416400-417600 (orc2-1/wt peak ratio: 0.32)
Chr11:416945-416955
Chr11:416225-418175 (orc1-bah-delta/wt peak ratio: 0.59)
Chr11:419463 (Trep: 23.9 min.) (Confidence: 9)
Chr11:417002 (Trep: 23.3 min.)
Chr11:420250 (Peak first observed at 17.5 min.)
Chr11:417666 (Activity detected in: rad53)
Chr11:416822-417055 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XI-417 has unique ID: 381
Nieduszynski et al. (2006): | G | A | A | G | T | T | T | A | A | T | T | T | T | A | G | G | ||||||||||||||||||||||||||
Eaton et al. (2010): | G | A | A | G | T | T | T | A | A | T | T | T | T | A | G | G | T | G | T | C | G | G | G | A | G | A | A | A | C | A | T | T | T | |||||||||
ACS LOGO: |
ARS at XI-417 has unique ID: 381
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
S. cerevisiae | T | G | T | G | T | T | A | G | A | A | T | T | G | A | C | A | G | A | T | T | G | A | A | G | T | T | T | A | A | T | T | T | T | A | G | G | T | G | T | C | G | G | G | A | G | A | A | A | C | A | T | T | T | T | A | A |
S. kudriavzevii | - | - | - | - | - | - | - | G | A | G | T | C | A | G | C | A | A | C | T | T | G | G | A | A | T | T | T | A | C | C | T | T | T | A | G | A | T | A | C | T | C | A | A | A | A | G | A | T | G | A | T | T | - | - | - | - |
S. mikatae | - | - | - | - | - | - | - | G | A | A | T | T | A | A | C | A | G | A | T | C | G | A | A | G | T | T | T | A | T | C | T | T | T | A | G | G | C | G | C | C | A | A | A | A | A | G | A | A | G | A | T | T | A | T | C | A |
S. paradoxus | C | G | T | A | T | T | A | G | A | G | T | T | G | G | C | A | G | G | T | T | A | A | A | A | T | T | T | A | A | T | T | T | T | A | G | G | T | G | T | C | A | C | A | A | G | A | G | A | G | G | T | T | T | T | T | C |
S. bayanus | - | T | T | G | T | T | A | A | A | G | C | T | A | A | T | A | G | - | T | A | G | A | A | A | T | T | T | A | G | G | T | T | T | A | G | A | T | G | C | C | C | A | A | A | A | T | A | T | G | A | T | T | T | C | A | T |
: | : | * | : | : | : | * | : | * | : | : | * | * | * | * | * | * | * | * | * | * | : | : | : | : | : | : | * | : | : | : | * | * |
ARS at XI-417 has unique ID: 381
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XI-417 has unique ID: 381
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
PubMed | PubMed Central | Genes Dev.
ARS at XI-417 has unique ID: 381