Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.
Genomic Location:
Chr1:40716-43300
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -168.4 ΔG° (kcal/mol) at location 41106.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 34.1 min.
Alvino et al. (2007) — Peak first observed at 17.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at I-42 has unique ID: 4
ARS at I-42 has unique ID: 4
Chr1:40716-43300
Chr1:41795-42274
None curated.
Chr1:41808-42182
Chr1:40716-43300
Chr1:41100-42800 (orc2-1/wt peak ratio: 0.88)
Chr1:42185-42195
Chr1:41225-42950 (orc1-bah-delta/wt peak ratio: 0.63)
Chr1:48283 (Trep: 34.1 min.) (Confidence: 5)
Chr1:39750 (Peak first observed at 17.5 min.)
Chr1:43000 (Activity detected in: rad53)
Chr1:41806-42306 (Activity detected in: eco1, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at I-42 has unique ID: 4
Xu et al. (2006): | T | A | T | A | T | T | T | T | A | T | T | T | T | T | T | T | T | T | T | T | T | C | G | A | T | T | A | A | T | T | G | A | A | T | ||||||||
Eaton et al. (2010): | A | A | A | A | T | T | A | A | C | A | A | T | T | A | G | G | T | T | C | A | T | A | G | T | C | C | C | C | T | A | A | T | T | |||||||||
ACS LOGO: | ![]() |
ARS at I-42 has unique ID: 4
ARS at I-42 has unique ID: 4
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at I-42 has unique ID: 4
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | BMC Genomics
None identified.
None identified.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at I-42 has unique ID: 4