Confirmed ARS at VIII-360

ARS816

Other names: proARS816

Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.

Genomic Location: Chr8:359469-359928
Within tandem intergenic space between TF(GAA)H2 and YHR126C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser

DNA Sequence:

Origin Sequence Elements: ACS predicted.

Helical Stability: Minimum -159.9 ΔG° (kcal/mol) at location 359799.

Time of Origin Replication (Trep): Raghuraman et al. (2001) — Trep: 33.6 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at VIII-360 has unique ID: 281

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ARS at VIII-360 has unique ID: 281

Studies that cloned this origin

Müller & Nieduszynski (2012): Chr8:359469-359928


Studies that analyzed this origin by 2D gel

None curated.


Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Wyrick et al. (2001): Chr8:359374-359704

Xu et al. (2006): Chr8:358955-360645

Shor et al. (2009): Chr8:359300-360400 (orc2-1/wt peak ratio: 0.49)

Szilard et al. (2010): Chr8:359605-359615

Müller et al. (2010): Chr8:359075-360275 (orc1-bah-delta/wt peak ratio: 0.33)


Studies that measured the replication time of this origin

Raghuraman et al. (2001): Chr8:362055 (Trep: 33.6 min.) (Confidence: 9)

Alvino et al. (2007): Chr8:359120 (Peak first observed at 12.5 min.)


Studies that measured the activity of this origin in hydroxyurea (HU)

Feng et al. (2006): Chr8:359500 (Activity detected in: rad53)

Crabbé et al. (2010): Chr8:358953-360647 (Activity detected in: ddc1, rad24, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)


Studies that predicted the location of this origin

This origin has not been predicted by any curated study.



ARS at VIII-360 has unique ID: 281

Studies that confirmed an essential ACS element

None curated.


Studies that predicted an essential ACS element

  Eaton et al. (2010):      TATTTTTATAATTTGGCCTCCAAATGTAAAAAT   
ACS LOGO:   ACS_logo  

ARS at VIII-360 has unique ID: 281

Alignments from the UCSC genome browser

No phylogenetic sequence conservation data.

ARS at VIII-360 has unique ID: 281

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at VIII-360 has unique ID: 281

Genome-wide studies that identified this origin

Raghuraman et al. (2001): PubMed | Science

Wyrick et al. (2001): PubMed | Science

Feng et al. (2006): PubMed | PubMed Central | Nat. Cell Biol.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Alvino et al. (2007): PubMed | PubMed Central | Mol. Cell. Biol.

Shor et al. (2009): PubMed | PubMed Central | PLoS Genet.

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Müller et al. (2010): PubMed | PubMed Central | Genes Dev.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.


Studies that cloned this origin

Müller & Nieduszynski (2012): PubMed | Genome Res.


Studies that analyzed this origin by 2D gel

None identified.


Studies that confirmed an essential ACS element

None identified.


Studies that predicted an essential ACS element

Eaton et al. (2010): PubMed | PubMed Central | Genes Dev.


ARS at VIII-360 has unique ID: 281