Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.
Genomic Location:
Chr5:406747-406949
Within convergent intergenic space between YER123W and YER124C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -145.1 ΔG° (kcal/mol) at location 406757.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 25.3 min.
Yabuki et al. (2002) — Trep: 24.6 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at V-407 has unique ID: 185
ARS at V-407 has unique ID: 185
Chr5:406747-406949
None curated.
Chr5:406428-407339
Chr5:406855-407745
Chr5:406875-406885
Chr5:406475-407375 (orc1-bah-delta/wt peak ratio: 0.43)
Chr5:404409 (Trep: 25.3 min.) (Confidence: 9)
Chr5:409386 (Trep: 24.6 min.)
Chr5:406670 (Peak first observed at 12.5 min.)
Chr5:408000 (Activity detected in: rad53)
Chr5:406747-406949 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at V-407 has unique ID: 185
| Nieduszynski et al. (2006): | T | T | T | T | T | T | A | T | A | T | A | T | A | G | T | C | ||||||||||||||||||||||||||
| ACS LOGO: |  | |||||||||||||||||||||||||||||||||||||||||
ARS at V-407 has unique ID: 185
| Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| S. cerevisiae | T | C | A | A | G | T | T | T | G | T | A | A | T | T | G | T | G | C | A | T | T | T | T | T | T | T | A | T | A | T | A | T | A | G | T | C | C | C | G | C | T | C | T | C | A | A | G | T | G | A | A | T | T | A | G | A |
| S. kudriavzevii | T | C | C | A | A | C | T | T | G | T | T | A | T | T | C | T | G | C | A | T | T | T | T | T | T | T | A | T | G | T | C | T | T | G | C | T | T | T | A | T | T | T | T | T | C | T | A | C | T | T | T | A | A | A | G | A |
| S. mikatae | - | - | - | - | - | - | - | - | G | T | C | A | T | T | T | T | G | C | A | T | T | T | T | T | T | T | A | T | A | T | T | T | T | G | T | C | T | T | T | T | T | G | T | C | C | T | G | T | A | G | A | A | A | A | G | A |
| S. paradoxus | T | C | T | A | A | T | T | T | G | T | C | A | T | A | A | T | G | C | A | T | T | T | T | T | T | T | A | T | A | T | C | T | A | G | T | T | C | T | T | C | T | T | C | C | T | G | A | T | T | C | A | T | T | G | A | A |
| S. bayanus | T | C | T | G | A | A | - | - | - | - | - | - | - | - | - | - | - | - | A | C | A | T | A | T | T | T | A | T | G | T | C | T | A | G | T | T | T | T | G | T | T | C | T | T | T | A | A | T | G | A | T | T | T | G | A | C |
| : | : | : | : | : | : | : | : | : | : | : | : | : | * | : | : | * | : | * | * | * | * | * | * | : | * | * | : | : | * | : | : | : | : | |||||||||||||||||||||||
ARS at V-407 has unique ID: 185
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at V-407 has unique ID: 185
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
ARS at V-407 has unique ID: 185
