Status: Confirmed ARS: Confirmed by ARS assay and identified by 8 genome-wide studies.
Genomic Location:
Chr5:287504-287750
Within tandem intergenic space between YER065C and TS(UGA)E.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -146.2 ΔG° (kcal/mol) at location 287714.
Time of Origin Replication (Trep):
Yabuki et al. (2002) — Trep: 22.6 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at V-288 has unique ID: 181
ARS at V-288 has unique ID: 181
Chr5:287504-287750
None curated.
Chr5:286912-287743
Chr5:286005-288945
Chr5:286900-288700 (orc2-1/wt peak ratio: 1.06)
Chr5:287615-287625
Chr5:286850-288650 (orc1-bah-delta/wt peak ratio: 0.88)
Chr5:287386 (Trep: 22.6 min.)
Chr5:285120 (Peak first observed at 12.5 min.)
Chr5:287504-287750 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at V-288 has unique ID: 181
Nieduszynski et al. (2006): | T | T | T | A | T | T | T | A | T | G | T | T | T | T | G | T | ||||||||||||||||||||||||||
Xu et al. (2006): | T | T | T | A | T | T | T | A | T | G | T | T | T | T | G | T | T | C | C | C | A | G | C | G | G | G | C | A | T | C | T | T | T | C | ||||||||
Eaton et al. (2010): | T | T | T | A | T | T | T | A | T | G | T | T | T | T | G | T | T | C | C | C | A | G | C | G | G | G | C | A | T | C | T | T | T | |||||||||
ACS LOGO: |
ARS at V-288 has unique ID: 181
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
S. cerevisiae | G | C | T | A | T | A | T | T | G | T | A | C | T | C | T | T | G | A | A | T | T | T | T | A | T | T | T | A | T | G | T | T | T | T | G | T | T | C | C | C | A | G | C | G | G | G | C | A | T | C | T | T | T | C | A | A |
S. kudriavzevii | A | C | T | C | - | - | T | T | G | C | A | C | G | C | T | C | A | G | T | T | T | T | T | T | T | T | T | A | T | G | T | T | T | T | G | T | T | T | G | A | G | A | T | G | A | A | G | A | A | A | A | A | T | T | A | T |
S. mikatae | G | C | T | C | C | A | C | T | G | T | A | T | T | C | T | T | T | A | T | T | C | T | T | A | T | T | T | A | T | A | T | T | T | T | G | T | T | G | T | A | A | A | A | A | A | A | G | A | T | G | A | A | T | A | A | A |
S. paradoxus | G | C | T | A | T | A | T | T | G | C | G | C | T | C | T | T | - | - | A | T | T | T | T | T | T | T | T | A | C | A | T | T | T | T | G | T | T | G | C | A | A | G | A | A | A | A | A | A | T | C | C | C | A | G | T | G |
: | * | * | : | : | * | * | : | : | : | * | * | : | * | : | * | * | * | * | * | * | : | * | * | * | * | * | * | * | : | * | : | : | : |
ARS at V-288 has unique ID: 181
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at V-288 has unique ID: 181
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at V-288 has unique ID: 181