Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.
Genomic Location:
Chr4:1486905-1487149
Within tandem intergenic space between YDR523C and YDR524C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -145.0 ΔG° (kcal/mol) at location 1486905.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 35.9 min.
Yabuki et al. (2002) — Trep: 28.6 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at IV-1487 has unique ID: 162
ARS at IV-1487 has unique ID: 162
Chr4:1486905-1487149
None curated.
Chr4:1487086-1487590
Chr4:1485700-1488000
Chr4:1486700-1487400 (orc2-1/wt peak ratio: 0.29)
Chr4:1486985-1486995
Chr4:1486775-1487450 (orc1-bah-delta/wt peak ratio: 0.21)
Chr4:1489130 (Trep: 35.9 min.) (Confidence: 9)
Chr4:1489791 (Trep: 28.6 min.)
Chr4:1487000 (Activity detected in: rad53)
Chr4:1486905-1487149 (Activity detected in: ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at IV-1487 has unique ID: 162
Nieduszynski et al. (2006): | C | T | T | T | T | T | A | A | A | T | T | T | A | G | T | T | ||||||||||||||||||||||||||
Xu et al. (2006): | T | T | G | C | T | T | T | T | T | A | A | A | T | T | T | A | G | T | T | T | T | T | T | T | A | C | T | A | G | C | T | A | A | T | ||||||||
ACS LOGO: |
ARS at IV-1487 has unique ID: 162
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
S. cerevisiae | A | G | A | A | A | G | C | A | A | A | C | C | A | G | C | A | T | T | T | G | C | T | T | T | T | T | A | A | A | T | T | T | A | G | T | T | T | T | T | T | T | A | C | T | A | G | C | T | A | A | T | T | C | A | T | T |
S. kudriavzevii | A | A | A | A | A | G | C | A | A | A | C | C | A | G | C | G | T | T | T | G | C | G | T | T | A | T | A | A | T | T | C | T | A | G | T | C | T | T | T | T | - | A | C | T | A | G | C | T | A | A | C | C | A | A | T | T |
S. paradoxus | A | G | A | - | - | G | C | A | A | A | T | C | A | G | C | A | T | T | T | G | C | T | T | T | T | T | A | A | T | T | T | T | A | G | T | T | T | T | T | T | T | A | C | T | G | G | C | T | A | A | T | T | C | A | T | T |
S. bayanus | A | A | A | G | A | G | C | A | A | T | C | C | G | C | C | A | T | T | T | G | C | G | T | T | A | T | A | A | C | T | T | T | A | G | T | T | T | A | T | C | - | A | T | T | A | G | C | T | A | G | A | T | C | A | T | T |
* | * | : | * | * | * | * | : | : | * | : | : | * | : | * | * | * | * | * | * | * | * | * | * | * | : | * | * | * | * | : | * | : | * | : | * | : | * | : | * | * | * | * | : | : | : | * | * | * |
ARS at IV-1487 has unique ID: 162
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at IV-1487 has unique ID: 162
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
PubMed | PubMed Central | BMC Genomics
ARS at IV-1487 has unique ID: 162