Status: Confirmed ARS: Confirmed by ARS assay and identified by 7 genome-wide studies.
Genomic Location:
Chr11:454453-459197
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -161.1 ΔG° (kcal/mol) at location 456553.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 20.7 min.
Alvino et al. (2007) — Peak first observed at 10.0 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XI-457 has unique ID: 643
ARS at XI-457 has unique ID: 643
Chr11:454453-459197
None curated.
Chr11:456095-458435
Chr11:456600-457600 (orc2-1/wt peak ratio: 0.27)
Chr11:457245-457255
Chr11:455900-457700 (orc1-bah-delta/wt peak ratio: 0.27)
Chr11:449978 (Trep: 20.7 min.) (Confidence: 9)
Chr11:448220 (Peak first observed at 10.0 min.)
Chr11:456733-457233 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XI-457 has unique ID: 643
Xu et al. (2006): | C | T | A | A | A | G | T | T | T | T | T | A | T | C | G | T | T | T | T | G | T | T | T | A | T | G | C | T | T | C | G | A | T | A | ||||||||
Eaton et al. (2010): | G | T | T | T | T | T | A | T | C | G | T | T | T | T | G | T | T | T | A | T | G | C | T | T | C | G | A | T | A | T | T | T | T | |||||||||
ACS LOGO: |
ARS at XI-457 has unique ID: 643
ARS at XI-457 has unique ID: 643
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XI-457 has unique ID: 643
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | PLoS Genet.
None identified.
None identified.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at XI-457 has unique ID: 643