Confirmed ARS at XIV-29

ARS1405

Other names: proARS1405

Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.

Genomic Location: Chr14:28467-28699
Within tandem intergenic space between YNL326C and YNL325C.
View at UCSC genome browser
View on SGD Chromosome Features Map
View at SGD gbrowser site
View at Ensembl browser

DNA Sequence:

Origin Sequence Elements: ACS predicted.

Helical Stability: Minimum -139.8 ΔG° (kcal/mol) at location 28497.

Time of Origin Replication (Trep): Yabuki et al. (2002) — Trep: 32.0 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at XIV-29 has unique ID: 501

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ARS at XIV-29 has unique ID: 501

Studies that cloned this origin

Nieduszynski et al. (2006): Chr14:28467-28699


Studies that analyzed this origin by 2D gel

None curated.


Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Wyrick et al. (2001): Chr14:27353-28318

Xu et al. (2006): Chr14:26546-29538

Shor et al. (2009): Chr14:28400-29100 (orc2-1/wt peak ratio: 0.09)

Szilard et al. (2010): Chr14:28545-28555

Müller et al. (2010): Chr14:28475-29075 (orc1-bah-delta/wt peak ratio: 0.59)


Studies that measured the replication time of this origin

Yabuki et al. (2002): Chr14:25469 (Trep: 32.0 min.)

Alvino et al. (2007): Chr14:30143 (Peak first observed at 12.5 min.)


Studies that measured the activity of this origin in hydroxyurea (HU)

Feng et al. (2006): Chr14:27500 (Activity detected in: rad53)

Crabbé et al. (2010): Chr14:28467-28699 (Activity detected in: ctf18 rad9, mec1-100, rad53, mec1)


Studies that predicted the location of this origin

This origin has not been predicted by any curated study.



ARS at XIV-29 has unique ID: 501

Studies that confirmed an essential ACS element

None curated.


Studies that predicted an essential ACS element

  Nieduszynski et al. (2006):       TTTTTTATTTTTAGGT                   
  Xu et al. (2006):      TATTTTTTTATTTTTAGGTGCTAAAGGCTATTTC  
ACS LOGO:   ACS_logo  

ARS at XIV-29 has unique ID: 501

Alignments from the UCSC genome browser

Predicted ACS
S. cerevisiaeACATGTTGGTGTTTTAATATTTTTTTATTTTTAGGTGCTAAAGGCTATTTCAACTT
S. kudriavzeviiATTTCTTAAAGTTTCATAAATTTGGTATTTTTGCGTCTGAAGTGCTAATTTAAGCT
S. mikataeAATTAAGATTGTTTTTTCTGTTTTATATTGGTAAGCCGTAAGAAACATTTTAGCCC
S. paradoxusACATGTTGGTGTTTTAATATTTTTTTATTTTTAGGTGCTAAAGGCTATTTCAACTT
S. bayanusTTTTATCAACGCGTTTCGAGTTTTATATTT-TGTGTTGAAAATGCAAATTTAAGCC
:*:*::*::***:****:**:**::****:

ARS at XIV-29 has unique ID: 501

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at XIV-29 has unique ID: 501

Genome-wide studies that identified this origin

Wyrick et al. (2001): PubMed | Science

Yabuki et al. (2002): PubMed

Feng et al. (2006): PubMed | PubMed Central | Nat. Cell Biol.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Alvino et al. (2007): PubMed | PubMed Central | Mol. Cell. Biol.

Shor et al. (2009): PubMed | PubMed Central | PLoS Genet.

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Müller et al. (2010): PubMed | PubMed Central | Genes Dev.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.


Studies that cloned this origin

Nieduszynski et al. (2006): PubMed | PubMed Central | Genes Dev.


Studies that analyzed this origin by 2D gel

None identified.


Studies that confirmed an essential ACS element

None identified.


Studies that predicted an essential ACS element

Nieduszynski et al. (2006): PubMed | PubMed Central | Genes Dev.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics


ARS at XIV-29 has unique ID: 501