Status: Confirmed ARS: Confirmed by ARS assay and identified by 7 genome-wide studies.
Genomic Location:
Chr13:158846-159279
Within tandem intergenic space between YML058W-A and YML058W.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -165.8 ΔG° (kcal/mol) at location 159116.
Time of Origin Replication (Trep): Raghuraman et al. (2001) — Trep: 22.1 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XIII-159 has unique ID: 460
ARS at XIII-159 has unique ID: 460
Chr13:158846-159279
None curated.
Chr13:158565-159795
Chr13:158400-159800 (orc2-1/wt peak ratio: 0.40)
Chr13:159115-159125
Chr13:158450-159800 (orc1-bah-delta/wt peak ratio: 0.57)
Chr13:159271 (Trep: 22.1 min.) (Confidence: 2)
Chr13:159000 (Activity detected in: rad53)
Chr13:158978-159478 (Activity detected in: ctf4, ddc1, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53)
This origin has not been predicted by any curated study.
ARS at XIII-159 has unique ID: 460
Xu et al. (2006): | T | G | T | T | T | T | T | A | T | G | T | T | T | A | G | A | C | C | T | C | G | T | A | C | A | T | A | G | G | A | A | T | A | A | ||||||||
Eaton et al. (2010): | T | G | T | T | T | T | T | A | T | G | T | T | T | A | G | A | C | C | T | C | G | T | A | C | A | T | A | G | G | A | A | T | A | |||||||||
ACS LOGO: |
ARS at XIII-159 has unique ID: 460
ARS at XIII-159 has unique ID: 460
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XIII-159 has unique ID: 460
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | PLoS Genet.
None identified.
None identified.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at XIII-159 has unique ID: 460