Status: Confirmed ARS: Confirmed by ARS assay and identified by 8 genome-wide studies.
Genomic Location:
Chr13:94216-94463
Within convergent intergenic space between YML088W and YML087C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -146.3 ΔG° (kcal/mol) at location 94436.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 22.9 min.
Yabuki et al. (2002) — Trep: 27.6 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XIII-94 has unique ID: 457
ARS at XIII-94 has unique ID: 457
Chr13:94216-94463
None curated.
Chr13:94602-95145
Chr13:93797-95102
Chr13:94555-94565
Chr13:92762 (Trep: 22.9 min.) (Confidence: 9)
Chr13:94074 (Trep: 27.6 min.)
Chr13:90889 (Peak first observed at 12.5 min.)
Chr13:94000 (Activity detected in: rad53)
Chr13:94216-94463 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XIII-94 has unique ID: 457
Nieduszynski et al. (2006): | T | T | A | A | T | T | A | T | A | T | T | T | A | G | A | T | ||||||||||||||||||||||||||
Xu et al. (2006): | A | T | T | A | A | T | T | A | T | A | T | T | T | A | G | A | T | A | T | A | T | A | T | T | C | G | T | A | T | T | T | T | A | T | ||||||||
ACS LOGO: |
ARS at XIII-94 has unique ID: 457
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
S. cerevisiae | A | T | T | T | T | T | C | A | T | G | T | A | A | A | T | A | A | G | C | A | T | T | A | A | T | T | A | T | A | T | T | T | A | G | A | T | A | T | A | T | A | T | T | C | G | T | A | T | T | T | T | A | T | T | A | A |
S. kudriavzevii | T | T | T | T | C | G | C | G | T | G | T | A | A | A | T | A | - | - | C | A | T | A | A | A | T | G | A | T | A | T | T | T | A | G | A | T | A | T | A | T | A | T | T | C | A | T | G | C | T | G | A | - | - | T | A | A |
S. mikatae | A | T | T | T | T | C | T | A | T | G | T | A | A | A | T | A | - | G | C | A | T | T | A | A | T | T | A | T | G | T | T | T | T | T | A | T | A | T | A | T | A | T | T | C | C | T | T | A | T | T | T | - | T | T | A | A |
S. paradoxus | A | T | T | T | C | C | C | A | T | G | T | A | A | A | T | A | A | G | C | A | T | T | A | A | T | C | A | T | A | T | T | T | A | G | A | T | A | T | A | T | A | T | T | C | G | T | A | A | T | T | T | - | T | T | A | A |
S. bayanus | G | T | T | T | T | T | C | A | T | G | T | A | G | A | T | A | A | T | A | A | T | T | A | A | T | T | A | T | A | T | T | T | A | G | A | T | A | T | A | T | A | T | T | C | A | T | G | A | C | A | T | T | T | T | A | A |
* | * | * | : | : | * | * | * | * | : | * | * | * | : | * | * | : | * | * | * | * | * | : | * | * | * | : | : | * | * | * | * | * | * | * | * | * | * | * | : | : | : | : | : | * | * | * |
ARS at XIII-94 has unique ID: 457
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XIII-94 has unique ID: 457
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
PubMed | PubMed Central | BMC Genomics
ARS at XIII-94 has unique ID: 457