Status: Confirmed ARS: Confirmed by ARS assay and identified by 7 genome-wide studies.
Genomic Location:
Chr2:417739-418035
Within convergent intergenic space between YBR085W and YBR085C-A.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -140.3 ΔG° (kcal/mol) at location 417819.
Time of Origin Replication (Trep): Raghuraman et al. (2001) — Trep: 25.7 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at II-418 has unique ID: 42
ARS at II-418 has unique ID: 42
Chr2:417739-418035
None curated.
Chr2:416860-417958
Chr2:416515-418465
Chr2:417400-418400 (orc2-1/wt peak ratio: 0.34)
Chr2:417805-417815
Chr2:417425-418400 (orc1-bah-delta/wt peak ratio: 0.30)
Chr2:417419 (Trep: 25.7 min.) (Confidence: 3)
Chr2:417739-418035 (Activity detected in: ctf4, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at II-418 has unique ID: 42
Nieduszynski et al. (2006): | T | T | T | T | T | C | A | T | A | C | T | A | T | G | T | C | ||||||||||||||||||||||||||
ACS LOGO: |
ARS at II-418 has unique ID: 42
Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
S. cerevisiae | A | T | T | G | C | G | A | A | A | A | A | T | T | G | A | T | C | A | T | C | T | T | T | T | T | C | A | T | A | C | T | A | T | G | T | C | T | T | T | C | A | T | T | T | C | C | A | A | C | G | T | C | C | A | C | A |
S. kudriavzevii | A | T | T | G | C | A | T | A | G | G | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | T | A | C | A | T | A | A | T | G | T | C | T | T | T | C | A | T | C | T | C | T | A | A | A | A | A | C | C | A | G | A |
S. mikatae | G | C | T | G | C | G | T | A | A | A | A | T | T | G | A | G | C | A | T | C | T | T | T | G | T | T | A | T | A | T | T | A | T | G | C | T | T | T | T | C | A | T | C | T | T | C | A | G | A | A | T | A | T | A | T | A |
S. paradoxus | A | T | T | T | C | G | A | A | A | A | A | C | T | G | A | T | C | A | A | C | T | T | T | T | T | C | A | T | A | T | T | A | T | G | A | C | T | T | T | T | A | T | C | T | C | C | A | G | T | G | T | C | C | A | C | A |
S. bayanus | A | A | A | G | C | G | T | G | A | A | A | T | T | G | A | A | C | A | C | C | G | T | T | G | - | T | A | T | A | T | C | A | T | G | T | C | T | T | T | C | A | C | C | T | C | C | A | A | A | A | T | T | T | A | T | A |
: | : | : | * | : | : | : | : | : | : | : | : | : | : | : | : | : | * | : | * | : | * | * | * | : | * | * | * | : | * | : | : | * | : | : | * | : | : | * | * |
ARS at II-418 has unique ID: 42
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at II-418 has unique ID: 42
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
ARS at II-418 has unique ID: 42