ARS1626

Status: Confirmed ARS: Confirmed by ARS assay and identified by 6 genome-wide studies.

Genomic Location: Chr16:749094-749341
Within convergent intergenic space between YPR111W and YPR112C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser

DNA Sequence: View sequence

Origin Sequence Elements: ACS predicted.

Helical Stability: Minimum -153.6 ΔG° (kcal/mol) at location 749294.

Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at XVI-749 has unique ID: 629

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ARS at XVI-749 has unique ID: 629

Studies that cloned this origin

Nieduszynski et al. (2006): Chr16:749094-749341

Studies that analyzed this origin by 2D gel

None curated.

Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Wyrick et al. (2001): Chr16:748997-749253

Xu et al. (2006): Chr16:748165-750225

Szilard et al. (2010): Chr16:749105-749115

Müller et al. (2010): Chr16:749000-749375 (orc1-bah-delta/wt peak ratio: 1.01)

Studies that measured the replication time of this origin

The replication time of origin has not be reported by any curated study.

Studies that measured the activity of this origin in hydroxyurea (HU)

Feng et al. (2006): Chr16:749000 (Activity detected in: rad53)

Crabbé et al. (2010): Chr16:749094-749341 (Activity detected in: mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)

Studies that predicted the location of this origin

This origin has not been predicted by any curated study.

ARS at XVI-749 has unique ID: 629

Studies that confirmed an essential ACS element

None curated.

Studies that predicted an essential ACS element

Nieduszynski et al. (2006):

A

A

T

T

T

T

T

A

A

G

T

T

T

A

G

T

Xu et al. (2006):

T

T

T

T

T

A

A

G

T

T

T

A

G

T

A

A

T

C

T

T

T

T

T

C

G

G

G

A

T

G

A

G

A

T

ACS LOGO:

ARS at XVI-749 has unique ID: 629

Alignments from the UCSC genome browser

ARS at XVI-749 has unique ID: 629

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at XVI-749 has unique ID: 629

Genome-wide studies that identified this origin

Wyrick et al. (2001): PubMed | Science

Feng et al. (2006): PubMed | PubMed Central | Nat. Cell Biol.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Müller et al. (2010): PubMed | PubMed Central | Genes Dev.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.

Studies that cloned this origin

Nieduszynski et al. (2006): PubMed | PubMed Central | Genes Dev.

Studies that analyzed this origin by 2D gel

None identified.

Studies that confirmed an essential ACS element

None identified.

Studies that predicted an essential ACS element

Nieduszynski et al. (2006): PubMed | PubMed Central | Genes Dev.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

ARS at XVI-749 has unique ID: 629