Status: Likely ARS: Identified by 5 genome-wide studies.
Genomic Location:
Chr15:23-2646
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -160.9 ΔG° (kcal/mol) at location 31.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XV-1 has unique ID: 541
ARS at XV-1 has unique ID: 541
None curated.
None curated.
Chr15:2078-2894
Chr15:25-2644
Chr15:200-2300 (orc2-1/wt peak ratio: 0.84)
Chr15:200-1700 (orc1-bah-delta/wt peak ratio: 0.74)
The replication time of origin has not be reported by any curated study.
Chr15:23-1000 (Activity detected in: mrc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XV-1 has unique ID: 541
Xu et al. (2006): | T | A | T | T | T | T | T | A | T | G | T | T | T | A | G | G | T | G | A | T | T | T | T | A | G | T | G | G | T | G | A | T | T | T | ||||||||
Eaton et al. (2010): | T | A | T | T | T | T | T | A | T | G | T | T | T | A | G | G | T | G | A | T | T | T | T | A | G | T | G | G | T | G | A | T | T | |||||||||
ACS LOGO: |
ARS at XV-1 has unique ID: 541
ARS at XV-1 has unique ID: 541
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XV-1 has unique ID: 541
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
None identified.
None identified.
None identified.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Genes Dev.
ARS at XV-1 has unique ID: 541