Status: Confirmed ARS: Confirmed by ARS assay and identified by 7 genome-wide studies.
Genomic Location:
Chr16:565046-565289
Within tandem intergenic space between YPR004C and YPR005C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
DNA Sequence:
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -149.2 ΔG° (kcal/mol) at location 565136.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 21.5 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
ARS at XVI-565 has unique ID: 622
ARS at XVI-565 has unique ID: 622
Chr16:565046-565289
None curated.
Chr16:562975-565410
Chr16:563200-564600 (orc2-1/wt peak ratio: 0.25)
Chr16:563225-564575 (orc1-bah-delta/wt peak ratio: 0.59)
Chr16:560531 (Trep: 21.5 min.) (Confidence: 9)
Chr16:558000 (Peak first observed at 12.5 min.)
Chr16:564000 (Activity detected in: rad53)
Chr16:565046-565289 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
ARS at XVI-565 has unique ID: 622
| Nieduszynski et al. (2006): | G | T | T | T | T | T | A | A | T | T | T | T | T | A | G | T | ||||||||||||||||||||||||||
| ACS LOGO: |  | |||||||||||||||||||||||||||||||||||||||||
ARS at XVI-565 has unique ID: 622
| Predicted ACS | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| S. cerevisiae | G | T | T | T | G | T | T | G | A | T | T | A | T | T | T | T | A | A | T | T | G | T | T | T | T | T | A | A | T | T | T | T | T | A | G | T | T | A | G | T | A | G | A | T | T | T | T | C | G | T | T | C | G | A | G | G |
| S. kudriavzevii | G | - | T | T | G | G | T | G | A | T | T | C | T | A | T | A | T | A | T | G | A | - | T | T | T | C | A | G | G | T | C | T | T | A | G | T | T | G | G | C | A | C | A | T | T | C | T | C | G | T | T | C | G | A | G | A |
| S. mikatae | G | - | T | T | A | T | T | G | A | A | C | A | A | C | T | T | C | A | T | T | A | - | T | T | T | C | A | A | C | T | T | A | T | A | T | T | T | G | G | C | A | G | A | T | T | T | T | C | G | T | T | C | G | A | G | - |
| S. paradoxus | G | C | T | T | G | T | T | G | A | T | T | A | T | C | T | T | T | A | T | A | A | T | T | T | T | A | A | G | T | T | T | T | T | A | G | A | C | G | G | C | A | A | T | T | T | T | T | C | C | T | T | C | G | A | G | G |
| S. bayanus | C | - | T | A | G | G | T | G | A | C | T | A | C | C | G | G | T | A | A | A | A | - | A | T | C | G | T | G | C | T | T | T | T | T | A | T | G | A | G | C | A | T | A | G | T | T | T | T | T | G | T | C | G | A | G | G |
| : | : | * | : | : | * | * | * | : | : | : | : | : | * | : | : | : | * | : | : | : | * | : | : | * | : | : | * | : | * | : | : | * | : | * | : | : | * | * | * | * | * | |||||||||||||||
ARS at XVI-565 has unique ID: 622
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.
ARS at XVI-565 has unique ID: 622
PubMed | PubMed Central | Nat. Cell Biol.
PubMed | PubMed Central | BMC Genomics
PubMed | PubMed Central | Mol. Cell. Biol.
PubMed | PubMed Central | PLoS Genet.
PubMed | PubMed Central | Genes Dev.
PubMed | Nat. Struct. Mol. Biol.
PubMed | PubMed Central | Genes Dev.
None identified.
None identified.
PubMed | PubMed Central | Genes Dev.
ARS at XVI-565 has unique ID: 622
