Status: Confirmed ARS: Confirmed by ARS assay and identified by 4 genome-wide studies.
Within tandem intergenic space between YBL111C and YBL108C-A.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -154.2 ΔG° (kcal/mol) at location 6301.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity not detected in HU.
Chr2:5800-9000 (orc2-1/wt peak ratio: 0.90)
Chr2:5675-7700 (orc1-bah-delta/wt peak ratio: 0.77)
The replication time of origin has not be reported by any curated study.
This origin has not be reported as active in HU by any curated study.
This origin has not been predicted by any curated study.
|Xu et al. (2006):||A||A||T||T||T||T||T||A||T||G||T||T||T||A||G||G||T||G||A||T||T||T||T||A||G||T||G||G||T||A||A||T||T||T|
|Eaton et al. (2010):||A||A||T||T||T||T||T||A||T||G||T||T||T||A||G||G||T||G||A||T||T||T||T||A||G||T||G||G||T||A||A||T||T|
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.