ARS439.5

Status: Confirmed ARS: Confirmed by ARS assay and identified by 5 genome-wide studies.

Genomic Location: Chr4:1385151-1385630
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser

DNA Sequence: View sequence

Origin Sequence Elements: No elements have been reported for this origin.

Helical Stability: Minimum -165.5 ΔG° (kcal/mol) at location 1385611.

Time of Origin Replication (Trep): Raghuraman et al. (2001) — Trep: 31.5 min.
Yabuki et al. (2002) — Trep: 28.8 min.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at IV-1385 has unique ID: 155

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ARS at IV-1385 has unique ID: 155

Studies that cloned this origin

Müller & Nieduszynski (2012): Chr4:1385151-1385630

Studies that analyzed this origin by 2D gel

None curated.

Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Szilard et al. (2010): Chr4:1385545-1385555

Studies that measured the replication time of this origin

Raghuraman et al. (2001): Chr4:1380110 (Trep: 31.5 min.) (Confidence: 9)

Yabuki et al. (2002): Chr4:1384791 (Trep: 28.8 min.)

Studies that measured the activity of this origin in hydroxyurea (HU)

Feng et al. (2006): Chr4:1381500 (Activity detected in: rad53)

Crabbé et al. (2010): Chr4:1385627-1386127 (Activity detected in: ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)

Studies that predicted the location of this origin

This origin has not been predicted by any curated study.

ARS at IV-1385 has unique ID: 155

Studies that confirmed an essential ACS element

None curated.

Studies that predicted an essential ACS element

None curated.

ACS LOGO:

ARS at IV-1385 has unique ID: 155

Alignments from the UCSC genome browser

ARS at IV-1385 has unique ID: 155

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at IV-1385 has unique ID: 155

Genome-wide studies that identified this origin

Raghuraman et al. (2001): PubMed | Science

Yabuki et al. (2002): PubMed

Feng et al. (2006): PubMed | PubMed Central | Nat. Cell Biol.

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.

Studies that cloned this origin

Müller & Nieduszynski (2012): PubMed | Genome Res.

Studies that analyzed this origin by 2D gel

None identified.

Studies that confirmed an essential ACS element

None identified.

Studies that predicted an essential ACS element

None identified.

ARS at IV-1385 has unique ID: 155