Status: Dubious ARS: Identified by 4 genome-wide studies.
Probably within intergenic space between chromosome start and YCL073C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: No elements have been reported for this origin.
Helical Stability: Minimum -156.8 ΔG° (kcal/mol) at location 5241.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity not detected in HU.
Chr3:300-8500 (orc2-1/wt peak ratio: 0.87)
Chr3:3725-5225 (orc1-bah-delta/wt peak ratio: 0.39)
The replication time of origin has not be reported by any curated study.
This origin has not be reported as active in HU by any curated study.
This origin has not been predicted by any curated study.
These notes are manually curated. To submit notes for this replication origin site please contact us.
Friday, 18th August 2006 - Conrad Nieduszynski:
Carol Newlon's lab have checked this region for ARS activity and found none. [Thanks to Carol Newlon for this information.]