Confirmed ARS at VIII-406

ARS818.5

Status: Confirmed ARS: Confirmed by ARS assay and identified by 3 genome-wide studies.

Genomic Location: Chr8:406012-406508
Within tandem intergenic space between YHR154W and YHR155W.
View at UCSC genome browser
View on SGD Chromosome Features Map
View at SGD gbrowser site
View at Ensembl browser

DNA Sequence:

Origin Sequence Elements: No elements have been reported for this origin.

Helical Stability: Minimum -149.7 ΔG° (kcal/mol) at location 406482.

Time of Origin Replication (Trep): Raghuraman et al. (2001) — Trep: 33.8 min.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at VIII-406 has unique ID: 286

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ARS at VIII-406 has unique ID: 286

Studies that cloned this origin

Müller & Nieduszynski (2012): Chr8:406012-406508


Studies that analyzed this origin by 2D gel

None curated.


Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Szilard et al. (2010): Chr8:406125-406135


Studies that measured the replication time of this origin

Raghuraman et al. (2001): Chr8:403090 (Trep: 33.8 min.) (Confidence: 6)


Studies that measured the activity of this origin in hydroxyurea (HU)

Crabbé et al. (2010): Chr8:406211-406711 (Activity detected in: ctf8, ctf18, mrc1, mec1-100, rad53)


Studies that predicted the location of this origin

This origin has not been predicted by any curated study.



ARS at VIII-406 has unique ID: 286

Studies that confirmed an essential ACS element

None curated.


Studies that predicted an essential ACS element

None curated.

ACS LOGO:   ACS_logo  


ARS at VIII-406 has unique ID: 286

Alignments from the UCSC genome browser

No phylogenetic sequence conservation data.

ARS at VIII-406 has unique ID: 286

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at VIII-406 has unique ID: 286

Genome-wide studies that identified this origin

Raghuraman et al. (2001): PubMed | Science

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.


Studies that cloned this origin

Müller & Nieduszynski (2012): PubMed | Genome Res.


Studies that analyzed this origin by 2D gel

None identified.


Studies that confirmed an essential ACS element

None identified.


Studies that predicted an essential ACS element

None identified.


ARS at VIII-406 has unique ID: 286