Confirmed ARS at XIV-636

ARS1426

Other names: proARS1426

Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.

Genomic Location: Chr14:635660-635901
Within divergent intergenic space between YNR003C and YNR004W.
View at UCSC genome browser
View on SGD Chromosome Features Map
View at SGD gbrowser site
View at Ensembl browser

DNA Sequence:

Origin Sequence Elements: ACS predicted.

Helical Stability: Minimum -139.8 ΔG° (kcal/mol) at location 635660.

Time of Origin Replication (Trep): Yabuki et al. (2002) — Trep: 24.7 min.
Alvino et al. (2007) — Peak first observed at 10.0 min.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at XIV-636 has unique ID: ARS1426

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ARS at XIV-636 has unique ID: ARS1426

Studies that cloned this origin

Nieduszynski et al. (2006): Chr14:635660-635901


Studies that analyzed this origin by 2D gel

None curated.


Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Wyrick et al. (2001): Chr14:635296-635942

Xu et al. (2006): Chr14:634125-636615

Shor et al. (2009): Chr14:635300-636400 (orc2-1/wt peak ratio: 0.50)

Szilard et al. (2010): Chr14:635735-635745

Müller et al. (2010): Chr14:635225-636575 (orc1-bah-delta/wt peak ratio: 0.62)


Studies that measured the replication time of this origin

Yabuki et al. (2002): Chr14:635469 (Trep: 24.7 min.)

Alvino et al. (2007): Chr14:635670 (Peak first observed at 10.0 min.)


Studies that measured the activity of this origin in hydroxyurea (HU)

Feng et al. (2006): Chr14:636000 (Activity detected in: wild-type, rad53)

Crabbé et al. (2010): Chr14:635660-635901 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)


Studies that predicted the location of this origin

This origin has not been predicted by any curated study.



ARS at XIV-636 has unique ID: ARS1426

Studies that confirmed an essential ACS element

None curated.


Studies that predicted an essential ACS element

  Nieduszynski et al. (2006):       TTTTTTAATTTTAGTT                   
  Xu et al. (2006):      AATTTTTTTCTTTTTTTCTCACTTTTTAATACCT  
  Xu et al. (2006):      CTATTTTTTTAATTTTAGTTAAGTTTTCTTCTAA  
  Eaton et al. (2010):      TTTTTTTAATTTTAGTTAAGTTTTCTTCTAATT   
ACS LOGO:   ACS_logo  

ARS at XIV-636 has unique ID: ARS1426

Alignments from the UCSC genome browser

Predicted ACS
S. cerevisiaeTACCTTTTAATAGCCGCTATTTTTTTAATTTTAGTTAAGTTTTCTTCTAATTTTGA
S. kudriavzeviiTATCCTTTCAGCGCCAGTATACTTTCCACTTCAAA-------------GAGCTAAT
S. mikataeTATTATTTTAGAGTTGCTATTTTTTTATTTTTAGTTATTATTTATTCTAATATAGT
S. paradoxusTACCTCTTAGTGGCTGCTATTTTTTTAATTTTAGTTGAGATTTGTTCTGATTTCGC
S. bayanusTATTCTTGTATT-CCCTCATATGTTTAATTTTAGTTGTGATTTCGTCTTGTCTCGT
**:*:::::**::**::::**:*::::::::::::*:::

ARS at XIV-636 has unique ID: ARS1426

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at XIV-636 has unique ID: ARS1426

Genome-wide studies that identified this origin

Wyrick et al. (2001): PubMed | Science

Yabuki et al. (2002): PubMed

Feng et al. (2006): PubMed | PubMed Central | Nat. Cell Biol.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Alvino et al. (2007): PubMed | PubMed Central | Mol. Cell. Biol.

Shor et al. (2009): PubMed | PubMed Central | PLoS Genet.

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Müller et al. (2010): PubMed | PubMed Central | Genes Dev.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.


Studies that cloned this origin

Nieduszynski et al. (2006): PubMed | PubMed Central | Genes Dev.


Studies that analyzed this origin by 2D gel

None identified.


Studies that confirmed an essential ACS element

None identified.


Studies that predicted an essential ACS element

Nieduszynski et al. (2006): PubMed | PubMed Central | Genes Dev.

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Eaton et al. (2010): PubMed | PubMed Central | Genes Dev.


ARS at XIV-636 has unique ID: ARS1426