ARS1304.7

Status: Confirmed ARS: Confirmed by ARS assay and identified by 3 genome-wide studies.

Genomic Location: Chr13:73874-74373
Within convergent intergenic space between YML100W and YML099C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser

DNA Sequence: View sequence

Origin Sequence Elements: No elements have been reported for this origin.

Helical Stability: Minimum -151.1 ΔG° (kcal/mol) at location 74134.

Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at XIII-74 has unique ID: 734

DetailedDefaultZoomed Out

Loading - Please wait...

ARS at XIII-74 has unique ID: 734

Studies that cloned this origin

Müller & Nieduszynski (2012): Chr13:73874-74373

Studies that analyzed this origin by 2D gel

None curated.

Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Xu et al. (2006): Chr13:73497-74612

Shor et al. (2009): Chr13:70500-73600 (orc2-1/wt peak ratio: 0.67)

Studies that measured the replication time of this origin

The replication time of origin has not be reported by any curated study.

Studies that measured the activity of this origin in hydroxyurea (HU)

Crabbé et al. (2010): Chr13:73495-74614 (Activity detected in: rad53)

Studies that predicted the location of this origin

This origin has not been predicted by any curated study.

ARS at XIII-74 has unique ID: 734

Studies that confirmed an essential ACS element

None curated.

Studies that predicted an essential ACS element

None curated.

ACS LOGO:

ARS at XIII-74 has unique ID: 734

Alignments from the UCSC genome browser

ARS at XIII-74 has unique ID: 734

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at XIII-74 has unique ID: 734

Genome-wide studies that identified this origin

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Shor et al. (2009): PubMed | PubMed Central | PLoS Genet.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.

Studies that cloned this origin

Müller & Nieduszynski (2012): PubMed | Genome Res.

Studies that analyzed this origin by 2D gel

None identified.

Studies that confirmed an essential ACS element

None identified.

Studies that predicted an essential ACS element

None identified.

ARS at XIII-74 has unique ID: 734