Confirmed ARS at VII-607

ARS724.5

Status: Confirmed ARS: Confirmed by ARS assay and identified by 2 genome-wide studies.

Genomic Location: Chr7:607176-607619
Within tandem intergenic space between YGR058W and YGR059W.
View at UCSC genome browser
View on SGD Chromosome Features Map
View at SGD gbrowser site
View at Ensembl browser

DNA Sequence:

Origin Sequence Elements: No elements have been reported for this origin.

Helical Stability: Minimum -155.7 ΔG° (kcal/mol) at location 607596.

Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at VII-607 has unique ID: 690

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ARS at VII-607 has unique ID: 690

Studies that cloned this origin

Müller & Nieduszynski (2012): Chr7:607176-607619


Studies that analyzed this origin by 2D gel

None curated.


Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Xu et al. (2006): Chr7:607565-607885


Studies that measured the replication time of this origin

The replication time of origin has not be reported by any curated study.


Studies that measured the activity of this origin in hydroxyurea (HU)

Crabbé et al. (2010): Chr7:607563-607887 (Activity detected in: ddc1, rad24, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53)


Studies that predicted the location of this origin

This origin has not been predicted by any curated study.



ARS at VII-607 has unique ID: 690

Studies that confirmed an essential ACS element

None curated.


Studies that predicted an essential ACS element

None curated.

ACS LOGO:   ACS_logo  


ARS at VII-607 has unique ID: 690

Alignments from the UCSC genome browser

No phylogenetic sequence conservation data.

ARS at VII-607 has unique ID: 690

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at VII-607 has unique ID: 690

Genome-wide studies that identified this origin

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.


Studies that cloned this origin

Müller & Nieduszynski (2012): PubMed | Genome Res.


Studies that analyzed this origin by 2D gel

None identified.


Studies that confirmed an essential ACS element

None identified.


Studies that predicted an essential ACS element

None identified.


ARS at VII-607 has unique ID: 690