Status: Confirmed ARS: Confirmed by ARS assay and 2D gel and identified by 10 genome-wide studies.
Within tandem intergenic space between YFL009W and YFL008W.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS confirmed.
Helical Stability: Minimum -145.5 ΔG° (kcal/mol) at location 118951.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 21.5 min.
Yabuki et al. (2002) — Trep: 21.9 min.
Alvino et al. (2007) — Peak first observed at 10.0 min.
Origin activity in HU: Origin activity detected in HU — more details.
Chr6:118000-119100 (orc2-1/wt peak ratio: 0.34)
Chr6:118025-119075 (orc1-bah-delta/wt peak ratio: 0.34)
Chr6:122427 (Trep: 21.5 min.) (Confidence: 9)
Chr6:119863 (Trep: 21.9 min.)
Chr6:122670 (Peak first observed at 10.0 min.)
Chr6:118750 (Activity detected in: wild-type, rad53)
Chr6:118631-118952 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
|Yamashita et al. (1997):||T||T||T||C||C||A||T||A||T||T||T||T|
|Eaton et al. (2010):||T||G||C||T||T||T||T||A||T||A||T||T||T||T||T||T||T||A||G||A||T||C||A||T||T||T||T||C||A||A||A||A||C|
These notes are manually curated. To submit notes for this replication origin site please contact us.
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