Status: Dubious ARS: Identified by 5 genome-wide studies.
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -168.0 ΔG° (kcal/mol) at location 149888.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 23.3 min.
Alvino et al. (2007) — Peak first observed at 10.0 min.
Origin activity in HU: Origin activity not detected in HU.
Chr3:137800-139400 (orc2-1/wt peak ratio: 0.96)
Chr3:149825-151475 (orc1-bah-delta/wt peak ratio: 0.26)
Chr3:146448 (Trep: 23.3 min.) (Confidence: 8)
Chr3:133710 (Peak first observed at 10.0 min.)
This origin has not be reported as active in HU by any curated study.
This origin has not been predicted by any curated study.
|Xu et al. (2006):||T||T||T||T||A||T||T||T||T||T||T||G||A||A||T||A||T||T||T||T||T||T||A||T||T||T||A||T||A||T||A||C||G||T|
These notes are manually curated. To submit notes for this replication origin site please contact us.
Friday, 18th August 2006 - Conrad Nieduszynski:
Carol Newlon's lab report that there is no detectable ARS activity in this region. [Thanks to Carol Newlon for this information.]