Confirmed ARS at III-115

ARS308

Status: Confirmed ARS: Confirmed by ARS assay and identified by 6 genome-wide studies.

Genomic Location: Chr3:114314-114933
Within convergent intergenic space between YCL001W-B and YCR002C.
View at UCSC genome browser
View on SGD Chromosome Features Map
View at SGD gbrowser site
View at Ensembl browser

DNA Sequence:

Origin Sequence Elements: ACS predicted.

Helical Stability: Minimum -151.3 ΔG° (kcal/mol) at location 114914.

Time of Origin Replication (Trep): Raghuraman et al. (2001) — Trep: 19.8 min.
Yabuki et al. (2002) — Trep: 19.3 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.

Origin activity in HU: Origin activity detected in HU — more details.

ARS at III-115 has unique ID: 74

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ARS at III-115 has unique ID: 74

Studies that cloned this origin

Newlon et al. (1991): Chr3:114314-114933


Studies that analyzed this origin by 2D gel

None curated.


Studies that detected this origin by chromatin immunoprecipitation (ChIP)

Xu et al. (2006): Chr3:114695-115575

Szilard et al. (2010): Chr3:114795-114805


Studies that measured the replication time of this origin

Raghuraman et al. (2001): Chr3:115906 (Trep: 19.8 min.) (Confidence: 9)

Yabuki et al. (2002): Chr3:109863 (Trep: 19.3 min.)

Alvino et al. (2007): Chr3:113440 (Peak first observed at 12.5 min.)


Studies that measured the activity of this origin in hydroxyurea (HU)

Crabbé et al. (2010): Chr3:114314-114933 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)


Studies that predicted the location of this origin

This origin has not been predicted by any curated study.



ARS at III-115 has unique ID: 74

Studies that confirmed an essential ACS element

None curated.


Studies that predicted an essential ACS element

  Xu et al. (2006):      TACCTTTTTACTGTTAAGTTGCTTTACCAACTTT  
ACS LOGO:   ACS_logo  

ARS at III-115 has unique ID: 74

Alignments from the UCSC genome browser

No phylogenetic sequence conservation data.

ARS at III-115 has unique ID: 74

These notes are manually curated. To submit notes for this replication origin site please contact us.

There are no notes entered for this replication origin site.

ARS at III-115 has unique ID: 74

Genome-wide studies that identified this origin

Raghuraman et al. (2001): PubMed | Science

Yabuki et al. (2002): PubMed

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics

Alvino et al. (2007): PubMed | PubMed Central | Mol. Cell. Biol.

Szilard et al. (2010): PubMed | PubMed Central | Nat. Struct. Mol. Biol.

Crabbé et al. (2010): PubMed | Nat. Struct. Mol. Biol.


Studies that cloned this origin

Newlon et al. (1991): PubMed | PubMed Central


Studies that analyzed this origin by 2D gel

None identified.


Studies that confirmed an essential ACS element

None identified.


Studies that predicted an essential ACS element

Xu et al. (2006): PubMed | PubMed Central | BMC Genomics


ARS at III-115 has unique ID: 74