Status: Confirmed ARS: Confirmed by ARS assay and identified by 9 genome-wide studies.
Within tandem intergenic space between YCL005W and YCL004W.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS confirmed.
Helical Stability: Minimum -151.6 ΔG° (kcal/mol) at location 109105.
Time of Origin Replication (Trep):
Raghuraman et al. (2001) — Trep: 19.8 min.
Yabuki et al. (2002) — Trep: 19.3 min.
Alvino et al. (2007) — Peak first observed at 12.5 min.
Origin activity in HU: Origin activity detected in HU — more details.
Chr3:108725-109400 (orc1-bah-delta/wt peak ratio: 0.43)
Chr3:115906 (Trep: 19.8 min.) (Confidence: 9)
Chr3:109863 (Trep: 19.3 min.)
Chr3:113440 (Peak first observed at 12.5 min.)
Chr3:108250 (Activity detected in: wild-type, rad53)
Chr3:108775-109291 (Activity detected in: wild-type, rad9, rev3 rad30, eco1, ctf4, ddc1, rad24, pol2-12, elg1, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
|Palzkill & Newlon (1988):||T||A||T||T||T||A||T||G||T||T||T||T|
|Xu et al. (2006):||T||T||T||T||T||T||A||T||T||T||A||T||G||T||T||T||T||C||T||T||C||T||T||C||A||C||A||C||A||T||G||G||G||T|
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There are no notes entered for this replication origin site.