Status: Confirmed ARS: Confirmed by ARS assay and identified by 5 genome-wide studies.
Within intergenic space between chromosome start and YAL068C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -161.9 ΔG° (kcal/mol) at location 1391.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity detected in HU — more details.
Chr1:200-2800 (orc2-1/wt peak ratio: 0.83)
Chr1:200-2375 (orc1-bah-delta/wt peak ratio: 0.72)
The replication time of origin has not be reported by any curated study.
Chr1:950-1450 (Activity detected in: elg1, ctf8, ctf18, mrc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
|Xu et al. (2006):||T||A||T||T||T||T||T||A||T||G||T||T||T||A||G||G||T||G||A||T||T||T||T||T||G||T||G||G||G||G||A||T||T||T|
|Eaton et al. (2010):||T||A||T||T||T||T||T||A||T||G||T||T||T||A||G||G||T||G||A||T||T||T||T||T||G||T||G||G||G||G||A||T||T|
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.