Status: Confirmed ARS: Confirmed by ARS assay and identified by 15 genome-wide studies.
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS confirmed.
Helical Stability: Minimum -163.2 ΔG° (kcal/mol) at location 11853.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity detected in HU — more details.
Chr3:9400-17000 (orc2-1/wt peak ratio: 0.79)
Chr3:12650-15950 (orc1-bah-delta/wt peak ratio: 0.31)
The replication time of origin has not be reported by any curated study.
Chr3:12666 (Activity detected in: rad53)
Chr3:14574-14849 (Activity detected in: ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
|Sharma et al. (2001):||T||T||T||T||A||T||A||T||T||T||T||C|
|Xu et al. (2006):||T||T||T||G||T||T||T||A||T||G||T||C||T||A||T||G||T||A||T||T||T||G||T||A||T||A||A||A||A||T||A||T||G||A|
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.