Status: Dubious ARS: Identified by 3 genome-wide studies.
Resolution insufficient to assign intergenic space.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: No elements have been reported for this origin.
Helical Stability: Minimum -162.6 ΔG° (kcal/mol) at location 54234.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity detected in HU — more details.
Chr6:53100-54300 (orc2-1/wt peak ratio: 1.08)
The replication time of origin has not be reported by any curated study.
Chr6:52765-53265 (Activity detected in: ddc1, rad24, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
These notes are manually curated. To submit notes for this replication origin site please contact us.
Friday, 4th December 2009 - Conrad Nieduszynski:
Shor et al. (2009) report that there is no detectable ARS activity in this region.