Status: Confirmed ARS: Confirmed by ARS assay and identified by 7 genome-wide studies.
Within tandem intergenic space between YDL078C and YDL077C.
• View at UCSC genome browser
• View on SGD Chromosome Features Map
• View at SGD gbrowser site
• View at Ensembl browser
Origin Sequence Elements: ACS predicted.
Helical Stability: Minimum -149.1 ΔG° (kcal/mol) at location 317019.
Time of Origin Replication (Trep): This site was not identified as an origin by any curated timing study (Raghuraman et al. (2001); Yabuki et al. (2002); Alvino et al. (2007)), suggesting that this site is not chromosomally active for replication initiation.
Origin activity in HU: Origin activity detected in HU — more details.
Chr4:316600-317400 (orc2-1/wt peak ratio: 0.53)
Chr4:316250-317525 (orc1-bah-delta/wt peak ratio: 0.28)
The replication time of origin has not be reported by any curated study.
Chr4:317500 (Activity detected in: rad53)
Chr4:316762-317262 (Activity detected in: ctf4, pol2-12, tof1, mrc1-AQ, mrc1-AQ rad9, ctf8, ctf18, mrc1, dcc1, ctf18 rad9, mec1-100, rad53, mec1)
This origin has not been predicted by any curated study.
|Xu et al. (2006):||A||A||T||T||T||T||A||A||A||T||T||T||T||G||T||T||C||T||T||T||T||C||C||T||A||A||A||C||A||A||T||T||C||A|
|Eaton et al. (2010):||T||A||A||T||T||T||T||A||A||A||T||T||T||T||G||T||T||C||T||T||T||T||C||C||T||A||A||A||C||A||A||T||T|
These notes are manually curated. To submit notes for this replication origin site please contact us.
There are no notes entered for this replication origin site.